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Initial version for thomaswue with Oracle GraalVM Native Image

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* Initial version.

* Make PGO feature optional off-by-default. Needs PGO_MODE environment
variable to be set. Add -O3 -march=native tuning flags for better
performance.

* Adjust script to be more quiet.

* Adjust max city length. Fix an issue when accumulating results.

* Tune thomaswue submission.
mmap the entire file, use Unsafe directly instead of ByteBuffer, avoid byte[] copies.
These tricks give a ~30% speedup, over an already fast implementation.

* Optimize parsing of numbers based on specific given constraints.

* Fix for segment calculation for case of very small input.

* Minor shell script fixes.

* Separate out build step into file additional_build_step_thomaswue.sh,
simplify run script and remove PGO option for now.

* Minor corrections to the run script.

---------

Co-authored-by: Alfonso² Peterssen <alfonso.peterssen@oracle.com>
This commit is contained in:
Thomas Wuerthinger
2024-01-06 10:55:07 +01:00
committed by GitHub
parent 093bd35c44
commit a53aa2e6fd
3 changed files with 262 additions and 0 deletions
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21
additional_build_step_thomaswue.sh Executable file
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#!/bin/sh
#
# Copyright 2023 The original authors
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
source "$HOME/.sdkman/bin/sdkman-init.sh"
sdk use java 21.0.1-graal 1>&2
NATIVE_IMAGE_OPTS="--gc=epsilon -O3 -march=native --enable-preview"
native-image $NATIVE_IMAGE_OPTS -cp target/average-1.0.0-SNAPSHOT.jar -o image_calculateaverage_thomaswue dev.morling.onebrc.CalculateAverage_thomaswue

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calculate_average_thomaswue.sh Executable file
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#!/bin/sh
#
# Copyright 2023 The original authors
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
if [ -f ./image_calculateaverage_thomaswue ]; then
echo "Picking up existing native image, delete the file to select JVM mode." 1>&2
time ./image_calculateaverage_thomaswue
else
source "$HOME/.sdkman/bin/sdkman-init.sh"
sdk use java 21.0.1-graal 1>&2
JAVA_OPTS="--enable-preview"
echo "Chosing to run the app in JVM mode as no native image was found, use additional_build_step_thomaswue.sh to generate." 1>&2
time java $JAVA_OPTS --class-path target/average-1.0.0-SNAPSHOT.jar dev.morling.onebrc.CalculateAverage_thomaswue
fi

212
src/main/java/dev/morling/onebrc/CalculateAverage_thomaswue.java Normal file
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/*
* Copyright 2023 The original authors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package dev.morling.onebrc;
import sun.misc.Unsafe;
import java.io.IOException;
import java.lang.foreign.Arena;
import java.lang.reflect.Field;
import java.nio.channels.FileChannel;
import java.nio.channels.FileChannel.MapMode;
import java.nio.charset.StandardCharsets;
import java.nio.file.Path;
import java.nio.file.StandardOpenOption;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.TreeMap;
import java.util.stream.IntStream;
public class CalculateAverage_thomaswue {
private static final String FILE = "./measurements.txt";
// Holding the current result for a single city.
private static class Result {
int min;
int max;
long sum;
int count;
final long nameAddress;
final int nameLength;
private Result(long nameAddress, int nameLength, int value) {
this.nameAddress = nameAddress;
this.nameLength = nameLength;
this.min = value;
this.max = value;
this.sum = value;
this.count = 1;
}
public String toString() {
return round(((double) min) / 10.0) + "/" + round((((double) sum) / 10.0) / count) + "/" + round(((double) max) / 10.0);
}
private static double round(double value) {
return Math.round(value * 10.0) / 10.0;
}
// Accumulate another result into this one.
private void add(Result other) {
min = Math.min(min, other.min);
max = Math.max(max, other.max);
sum += other.sum;
count += other.count;
}
}
public static void main(String[] args) throws IOException {
// Calculate input segments.
int numberOfChunks = Runtime.getRuntime().availableProcessors();
long[] chunks = getSegments(numberOfChunks);
// Parallel processing of segments.
List<HashMap<String, Result>> allResults = IntStream.range(0, chunks.length - 1).mapToObj(chunkIndex -> {
HashMap<String, Result> cities = HashMap.newHashMap(1 << 10);
Result[] results = new Result[1 << 14];
parseLoop(chunks[chunkIndex], chunks[chunkIndex + 1], results, cities);
return cities;
}).parallel().toList();
// Accumulate results sequentially.
HashMap<String, Result> result = allResults.getFirst();
for (int i = 1; i < allResults.size(); ++i) {
for (Map.Entry<String, Result> entry : allResults.get(i).entrySet()) {
Result current = result.get(entry.getKey());
if (current != null) {
current.add(entry.getValue());
}
else {
result.put(entry.getKey(), entry.getValue());
}
}
}
// Final output.
System.out.println(new TreeMap<>(result));
}
private static final Unsafe UNSAFE = initUnsafe();
private static Unsafe initUnsafe() {
try {
Field theUnsafe = Unsafe.class.getDeclaredField("theUnsafe");
theUnsafe.setAccessible(true);
return (Unsafe) theUnsafe.get(Unsafe.class);
}
catch (NoSuchFieldException | IllegalAccessException e) {
throw new RuntimeException(e);
}
}
static boolean unsafeEquals(long aStart, long aLength, long bStart, long bLength) {
if (aLength != bLength) {
return false;
}
for (int i = 0; i < aLength; ++i) {
if (UNSAFE.getByte(aStart + i) != UNSAFE.getByte(bStart + i)) {
return false;
}
}
return true;
}
private static void parseLoop(long chunkStart, long chunkEnd, Result[] results, HashMap<String, Result> cities) {
long scanPtr = chunkStart;
byte b;
while (scanPtr < chunkEnd) {
long nameAddress = scanPtr;
int hash = UNSAFE.getByte(scanPtr++);
while ((b = UNSAFE.getByte(scanPtr++)) != ';') {
hash += b;
hash += hash << 10;
hash ^= hash >> 6;
}
int nameLength = (int) (scanPtr - 1 - nameAddress);
hash = hash & (results.length - 1);
int number;
byte sign = UNSAFE.getByte(scanPtr++);
if (sign == '-') {
number = UNSAFE.getByte(scanPtr++) - '0';
if ((b = UNSAFE.getByte(scanPtr++)) != '.') {
number = number * 10 + (b - '0');
scanPtr++;
}
number = number * 10 + (UNSAFE.getByte(scanPtr++) - '0');
number = -number;
}
else {
number = sign - '0';
if ((b = UNSAFE.getByte(scanPtr++)) != '.') {
number = number * 10 + (b - '0');
scanPtr++;
}
number = number * 10 + (UNSAFE.getByte(scanPtr++) - '0');
}
while (true) {
Result existingResult = results[hash];
if (existingResult == null) {
Result r = new Result(nameAddress, nameLength, number);
results[hash] = r;
byte[] bytes = new byte[nameLength];
UNSAFE.copyMemory(null, nameAddress, bytes, Unsafe.ARRAY_BYTE_BASE_OFFSET, nameLength);
cities.put(new String(bytes, StandardCharsets.UTF_8), r);
break;
}
else if (unsafeEquals(existingResult.nameAddress, existingResult.nameLength, nameAddress, nameLength)) {
existingResult.min = Math.min(existingResult.min, number);
existingResult.max = Math.max(existingResult.max, number);
existingResult.sum += number;
existingResult.count++;
break;
}
else {
// Collision error, try next.
hash = (hash + 1) & (results.length - 1);
}
}
// Skip new line.
scanPtr++;
}
}
private static long[] getSegments(int numberOfChunks) throws IOException {
try (var fileChannel = FileChannel.open(Path.of(FILE), StandardOpenOption.READ)) {
long fileSize = fileChannel.size();
long segmentSize = (fileSize + numberOfChunks - 1) / numberOfChunks;
long[] chunks = new long[numberOfChunks + 1];
long mappedAddress = fileChannel.map(MapMode.READ_ONLY, 0, fileSize, Arena.global()).address();
chunks[0] = mappedAddress;
long endAddress = mappedAddress + fileSize;
for (int i = 1; i < numberOfChunks; ++i) {
long chunkAddress = mappedAddress + i * segmentSize;
// Align to first row start.
while (chunkAddress < endAddress && UNSAFE.getByte(chunkAddress++) != '\n') {
// nop
}
chunks[i] = Math.min(chunkAddress, endAddress);
}
chunks[numberOfChunks] = endAddress;
return chunks;
}
}
}