Some fine tuning for thomaswue (#606)
* Some fine tuning. * Process 2MB segments to make all threads finish at the same time. Process with 3 scanners in parallel in the same thread.
This commit is contained in:
Thomas Wuerthinger
GitHub
parent
c8dd691a27
commit
7e525c5992
@ -20,7 +20,7 @@ sdk use java 21.0.2-graal 1>&2
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# ./mvnw clean verify removes target/ and will re-trigger native image creation.
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if [ ! -f target/CalculateAverage_thomaswue_image ]; then
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NATIVE_IMAGE_OPTS="--gc=epsilon -O3 -march=native --enable-preview -H:InlineAllBonus=10 -H:-ParseRuntimeOptions --initialize-at-build-time=dev.morling.onebrc.CalculateAverage_thomaswue\$Scanner"
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NATIVE_IMAGE_OPTS="--gc=epsilon -O3 -H:-GenLoopSafepoints -march=native --enable-preview -H:InlineAllBonus=10 -H:-ParseRuntimeOptions --initialize-at-build-time=dev.morling.onebrc.CalculateAverage_thomaswue\$Scanner"
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# Use -H:MethodFilter=CalculateAverage_thomaswue.* -H:Dump=:2 -H:PrintGraph=Network for IdealGraphVisualizer graph dumping.
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native-image $NATIVE_IMAGE_OPTS -cp target/average-1.0.0-SNAPSHOT.jar -o target/CalculateAverage_thomaswue_image dev.morling.onebrc.CalculateAverage_thomaswue
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fi
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@ -23,16 +23,17 @@ import java.nio.charset.StandardCharsets;
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import java.nio.file.Path;
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import java.nio.file.StandardOpenOption;
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import java.util.*;
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import java.util.concurrent.atomic.AtomicLong;
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import java.util.stream.IntStream;
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/**
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* Simple solution that memory maps the input file, then splits it into one segment per available core and uses
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* sun.misc.Unsafe to directly access the mapped memory. Uses a long at a time when checking for collision.
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* <p>
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* Runs in 0.60s on my Intel i9-13900K
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* Runs in 0.41s on my Intel i9-13900K
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* Perf stats:
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* 34,716,719,245 cpu_core/cycles/
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* 40,776,530,892 cpu_atom/cycles/
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* 25,286,227,376 cpu_core/cycles/
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* 26,833,723,225 cpu_atom/cycles/
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*/
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public class CalculateAverage_thomaswue {
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private static final String FILE = "./measurements.txt";
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@ -42,10 +43,11 @@ public class CalculateAverage_thomaswue {
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// Holding the current result for a single city.
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private static class Result {
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long lastNameLong, secondLastNameLong;
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long[] name;
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int count;
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short min, max;
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long min, max;
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long sum;
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int count;
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long[] name;
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String nameAsString;
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private Result() {
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this.min = MAX_TEMP;
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@ -73,36 +75,59 @@ public class CalculateAverage_thomaswue {
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}
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public String calcName() {
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ByteBuffer bb = ByteBuffer.allocate(name.length * Long.BYTES).order(ByteOrder.nativeOrder());
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bb.asLongBuffer().put(name);
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byte[] array = bb.array();
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int i = 0;
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while (array[i++] != ';')
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;
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return new String(array, 0, i - 1, StandardCharsets.UTF_8);
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if (nameAsString == null) {
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ByteBuffer bb = ByteBuffer.allocate(name.length * Long.BYTES).order(ByteOrder.nativeOrder());
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bb.asLongBuffer().put(name);
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byte[] array = bb.array();
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int i = 0;
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while (array[i++] != ';')
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;
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nameAsString = new String(array, 0, i - 1, StandardCharsets.UTF_8);
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}
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return nameAsString;
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}
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}
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public static void main(String[] args) throws IOException {
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public static void main(String[] args) throws IOException, InterruptedException {
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if (args.length == 0 || !("--worker".equals(args[0]))) {
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spawnWorker();
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return;
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}
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// Calculate input segments.
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int numberOfChunks = Runtime.getRuntime().availableProcessors();
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long[] chunks = getSegments(numberOfChunks);
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int numberOfWorkers = Runtime.getRuntime().availableProcessors();
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final AtomicLong cursor = new AtomicLong();
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final long fileEnd;
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final long fileStart;
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try (var fileChannel = FileChannel.open(Path.of(FILE), StandardOpenOption.READ)) {
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long fileSize = fileChannel.size();
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fileStart = fileChannel.map(FileChannel.MapMode.READ_ONLY, 0, fileSize, java.lang.foreign.Arena.global()).address();
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cursor.set(fileStart);
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fileEnd = fileStart + fileSize;
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}
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// Parallel processing of segments.
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List<List<Result>> allResults = IntStream.range(0, chunks.length - 1).mapToObj(chunkIndex -> parseLoop(chunks[chunkIndex], chunks[chunkIndex + 1]))
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.map(resultArray -> {
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List<Result> results = new ArrayList<>();
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for (Result r : resultArray) {
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if (r != null) {
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results.add(r);
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}
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Thread[] threads = new Thread[numberOfWorkers];
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List<Result>[] allResults = new List[numberOfWorkers];
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for (int i = 0; i < threads.length; ++i) {
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final int index = i;
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threads[i] = new Thread(() -> {
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Result[] resultArray = parseLoop(cursor, fileEnd, fileStart);
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List<Result> results = new ArrayList<>(500);
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for (Result r : resultArray) {
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if (r != null) {
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r.calcName();
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results.add(r);
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}
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return results;
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}).parallel().toList();
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}
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allResults[index] = results;
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});
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threads[i].start();
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}
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for (Thread thread : threads) {
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thread.join();
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}
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// Final output.
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System.out.println(accumulateResults(allResults));
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@ -115,17 +140,12 @@ public class CalculateAverage_thomaswue {
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info.command().ifPresent(workerCommand::add);
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info.arguments().ifPresent(args -> workerCommand.addAll(Arrays.asList(args)));
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workerCommand.add("--worker");
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new ProcessBuilder()
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.command(workerCommand)
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.inheritIO()
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.redirectOutput(ProcessBuilder.Redirect.PIPE)
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.start()
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.getInputStream()
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.transferTo(System.out);
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new ProcessBuilder().command(workerCommand).inheritIO().redirectOutput(ProcessBuilder.Redirect.PIPE)
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.start().getInputStream().transferTo(System.out);
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}
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// Accumulate results sequentially for simplicity.
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private static TreeMap<String, Result> accumulateResults(List<List<Result>> allResults) {
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private static TreeMap<String, Result> accumulateResults(List<Result>[] allResults) {
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TreeMap<String, Result> result = new TreeMap<>();
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for (List<Result> resultArr : allResults) {
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for (Result r : resultArr) {
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@ -139,141 +159,220 @@ public class CalculateAverage_thomaswue {
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return result;
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}
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// Main parse loop.
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private static Result[] parseLoop(long chunkStart, long chunkEnd) {
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Result[] results = new Result[1 << 17];
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Scanner scanner = new Scanner(chunkStart, chunkEnd);
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long word = scanner.getLong();
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long pos = findDelimiter(word);
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while (scanner.hasNext()) {
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long nameAddress = scanner.pos();
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long hash = 0;
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private static Result findResult(long initialWord, long initialPos, Scanner scanner, Result[] results) {
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// Search for ';', one long at a time.
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Result existingResult;
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long word = initialWord;
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long pos = initialPos;
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long hash;
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long nameAddress = scanner.pos();
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// Search for ';', one long at a time.
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if (pos != 0) {
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pos = Long.numberOfTrailingZeros(pos) >>> 3;
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scanner.add(pos);
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word = mask(word, pos);
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hash = word;
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int index = hashToIndex(hash, results);
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existingResult = results[index];
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if (existingResult != null && existingResult.lastNameLong == word) {
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return existingResult;
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}
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else {
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scanner.setPos(nameAddress + pos);
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}
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}
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else {
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scanner.add(8);
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hash = word;
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long prevWord = word;
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word = scanner.getLong();
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pos = findDelimiter(word);
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if (pos != 0) {
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pos = Long.numberOfTrailingZeros(pos) >>> 3;
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scanner.add(pos);
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word = mask(word, pos);
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hash = word;
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hash ^= word;
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int index = hashToIndex(hash, results);
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existingResult = results[index];
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int number = scanNumber(scanner);
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long nextWord = scanner.getLong();
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long nextPos = findDelimiter(nextWord);
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Result existingResult = results[hashToIndex(hash, results)];
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if (existingResult != null && existingResult.lastNameLong == word) {
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word = nextWord;
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pos = nextPos;
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record(existingResult, number);
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continue;
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if (existingResult != null && existingResult.lastNameLong == word && existingResult.secondLastNameLong == prevWord) {
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return existingResult;
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}
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else {
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scanner.setPos(nameAddress + pos + 8);
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}
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scanner.setPos(nameAddress + pos);
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}
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else {
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scanner.add(8);
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hash = word;
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long prevWord = word;
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word = scanner.getLong();
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pos = findDelimiter(word);
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if (pos != 0) {
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pos = Long.numberOfTrailingZeros(pos) >>> 3;
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scanner.add(pos);
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word = mask(word, pos);
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hash ^= word;
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Result existingResult = results[hashToIndex(hash, results)];
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if (existingResult != null && existingResult.lastNameLong == word && existingResult.secondLastNameLong == prevWord) {
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int number = scanNumber(scanner);
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word = scanner.getLong();
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pos = findDelimiter(word);
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record(existingResult, number);
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continue;
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hash ^= word;
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while (true) {
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word = scanner.getLong();
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pos = findDelimiter(word);
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if (pos != 0) {
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pos = Long.numberOfTrailingZeros(pos) >>> 3;
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scanner.add(pos);
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word = mask(word, pos);
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hash ^= word;
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break;
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}
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}
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else {
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scanner.add(8);
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hash ^= word;
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while (true) {
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word = scanner.getLong();
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pos = findDelimiter(word);
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if (pos != 0) {
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pos = Long.numberOfTrailingZeros(pos) >>> 3;
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scanner.add(pos);
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word = mask(word, pos);
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hash ^= word;
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break;
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}
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else {
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scanner.add(8);
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hash ^= word;
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}
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else {
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scanner.add(8);
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hash ^= word;
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}
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}
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}
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// Save length of name for later.
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int nameLength = (int) (scanner.pos() - nameAddress);
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int number = scanNumber(scanner);
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// Final calculation for index into hash table.
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int tableIndex = hashToIndex(hash, results);
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outer: while (true) {
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Result existingResult = results[tableIndex];
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if (existingResult == null) {
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existingResult = newEntry(results, nameAddress, tableIndex, nameLength, scanner);
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}
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// Check for collision.
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int i = 0;
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int namePos = 0;
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for (; i < nameLength + 1 - 8; i += 8) {
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if (namePos >= existingResult.name.length || existingResult.name[namePos++] != scanner.getLongAt(nameAddress + i)) {
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tableIndex = (tableIndex + 31) & (results.length - 1);
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continue outer;
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}
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}
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int remainingShift = (64 - (nameLength + 1 - i) << 3);
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if (((existingResult.lastNameLong ^ (scanner.getLongAt(nameAddress + i) << remainingShift)) == 0)) {
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record(existingResult, number);
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break;
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}
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else {
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// Collision error, try next.
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tableIndex = (tableIndex + 31) & (results.length - 1);
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}
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}
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word = scanner.getLong();
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pos = findDelimiter(word);
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}
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return results;
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// Save length of name for later.
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int nameLength = (int) (scanner.pos() - nameAddress);
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// Final calculation for index into hash table.
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int tableIndex = hashToIndex(hash, results);
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outer: while (true) {
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existingResult = results[tableIndex];
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if (existingResult == null) {
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existingResult = newEntry(results, nameAddress, tableIndex, nameLength, scanner);
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}
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// Check for collision.
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int i = 0;
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long[] name = existingResult.name;
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for (; i < nameLength + 1 - 8; i += 8) {
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if (scanner.getLongAt(i, name) != scanner.getLongAt(nameAddress + i)) {
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tableIndex = (tableIndex + 31) & (results.length - 1);
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continue outer;
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}
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}
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int remainingShift = (64 - (nameLength + 1 - i) << 3);
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if (((existingResult.lastNameLong ^ (scanner.getLongAt(nameAddress + i) << remainingShift)) == 0)) {
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break;
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}
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else {
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// Collision error, try next.
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tableIndex = (tableIndex + 31) & (results.length - 1);
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}
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}
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return existingResult;
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}
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private static int scanNumber(Scanner scanPtr) {
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private static long nextNL(long prev) {
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while (true) {
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long currentWord = Scanner.UNSAFE.getLong(prev);
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long pos = findNewLine(currentWord);
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if (pos != 0) {
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prev += Long.numberOfTrailingZeros(pos) >>> 3;
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break;
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}
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else {
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prev += 8;
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}
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}
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return prev;
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}
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private static final int SEGMENT_SIZE = 1024 * 1024 * 2;
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// Main parse loop.
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private static Result[] parseLoop(AtomicLong counter, long fileEnd, long fileStart) {
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Result[] results = new Result[1 << 17];
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while (true) {
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long current = counter.addAndGet(SEGMENT_SIZE) - SEGMENT_SIZE;
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if (current >= fileEnd) {
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return results;
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}
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long segmentEnd = nextNL(Math.min(fileEnd - 1, current + SEGMENT_SIZE));
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long segmentStart;
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if (current == fileStart) {
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segmentStart = current;
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}
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else {
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segmentStart = nextNL(current) + 1;
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}
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long dist = (segmentEnd - segmentStart) / 3;
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long midPoint1 = nextNL(segmentStart + dist);
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long midPoint2 = nextNL(segmentStart + dist + dist);
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Scanner scanner1 = new Scanner(segmentStart, midPoint1);
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Scanner scanner2 = new Scanner(midPoint1 + 1, midPoint2);
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Scanner scanner3 = new Scanner(midPoint2 + 1, segmentEnd);
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while (true) {
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if (!scanner1.hasNext()) {
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break;
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}
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if (!scanner2.hasNext()) {
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break;
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}
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if (!scanner3.hasNext()) {
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break;
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}
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long word1 = scanner1.getLong();
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long word2 = scanner2.getLong();
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long word3 = scanner3.getLong();
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long pos1 = findDelimiter(word1);
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long pos2 = findDelimiter(word2);
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long pos3 = findDelimiter(word3);
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Result existingResult1 = findResult(word1, pos1, scanner1, results);
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Result existingResult2 = findResult(word2, pos2, scanner2, results);
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Result existingResult3 = findResult(word3, pos3, scanner3, results);
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long number1 = scanNumber(scanner1);
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long number2 = scanNumber(scanner2);
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long number3 = scanNumber(scanner3);
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record(existingResult1, number1);
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record(existingResult2, number2);
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record(existingResult3, number3);
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}
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while (scanner1.hasNext()) {
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long word = scanner1.getLong();
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long pos = findDelimiter(word);
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record(findResult(word, pos, scanner1, results), scanNumber(scanner1));
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}
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while (scanner2.hasNext()) {
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long word = scanner2.getLong();
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long pos = findDelimiter(word);
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record(findResult(word, pos, scanner2, results), scanNumber(scanner2));
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}
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while (scanner3.hasNext()) {
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long word = scanner3.getLong();
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long pos = findDelimiter(word);
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record(findResult(word, pos, scanner3, results), scanNumber(scanner3));
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}
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}
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}
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private static long scanNumber(Scanner scanPtr) {
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scanPtr.add(1);
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long numberWord = scanPtr.getLong();
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int decimalSepPos = Long.numberOfTrailingZeros(~numberWord & 0x10101000);
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int number = convertIntoNumber(decimalSepPos, numberWord);
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long number = convertIntoNumber(decimalSepPos, numberWord);
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scanPtr.add((decimalSepPos >>> 3) + 3);
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return number;
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}
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private static void record(Result existingResult, int number) {
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private static void record(Result existingResult, long number) {
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if (number < existingResult.min) {
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existingResult.min = (short) number;
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existingResult.min = number;
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}
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if (number > existingResult.max) {
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existingResult.max = (short) number;
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existingResult.max = number;
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}
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existingResult.sum += number;
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existingResult.count++;
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}
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private static int hashToIndex(long hash, Result[] results) {
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int hashAsInt = (int) (hash ^ (hash >>> 28));
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int finalHash = (hashAsInt ^ (hashAsInt >>> 17));
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return (finalHash & (results.length - 1));
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long hashAsInt = hash ^ (hash >>> 37) ^ (hash >>> 17);
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return (int) (hashAsInt & (results.length - 1));
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}
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|
||||
private static long mask(long word, long pos) {
|
||||
@ -281,7 +380,7 @@ public class CalculateAverage_thomaswue {
|
||||
}
|
||||
|
||||
// Special method to convert a number in the ascii number into an int without branches created by Quan Anh Mai.
|
||||
private static int convertIntoNumber(int decimalSepPos, long numberWord) {
|
||||
private static long convertIntoNumber(int decimalSepPos, long numberWord) {
|
||||
int shift = 28 - decimalSepPos;
|
||||
// signed is -1 if negative, 0 otherwise
|
||||
long signed = (~numberWord << 59) >> 63;
|
||||
@ -292,8 +391,7 @@ public class CalculateAverage_thomaswue {
|
||||
// 0xUU00TTHH00 * (100 * 0x1000000 + 10 * 0x10000 + 1) =
|
||||
// 0x000000UU00TTHH00 + 0x00UU00TTHH000000 * 10 + 0xUU00TTHH00000000 * 100
|
||||
long absValue = ((digits * 0x640a0001) >>> 32) & 0x3FF;
|
||||
long value = (absValue ^ signed) - signed;
|
||||
return (int) value;
|
||||
return (absValue ^ signed) - signed;
|
||||
}
|
||||
|
||||
private static long findDelimiter(long word) {
|
||||
@ -302,6 +400,12 @@ public class CalculateAverage_thomaswue {
|
||||
return tmp;
|
||||
}
|
||||
|
||||
private static long findNewLine(long word) {
|
||||
long input = word ^ 0x0A0A0A0A0A0A0A0AL;
|
||||
long tmp = (input - 0x0101010101010101L) & ~input & 0x8080808080808080L;
|
||||
return tmp;
|
||||
}
|
||||
|
||||
private static Result newEntry(Result[] results, long nameAddress, int hash, int nameLength, Scanner scanner) {
|
||||
Result r = new Result();
|
||||
results[hash] = r;
|
||||
@ -324,27 +428,6 @@ public class CalculateAverage_thomaswue {
|
||||
return r;
|
||||
}
|
||||
|
||||
private static long[] getSegments(int numberOfChunks) throws IOException {
|
||||
try (var fileChannel = FileChannel.open(Path.of(FILE), StandardOpenOption.READ)) {
|
||||
long fileSize = fileChannel.size();
|
||||
long segmentSize = (fileSize + numberOfChunks - 1) / numberOfChunks;
|
||||
long[] chunks = new long[numberOfChunks + 1];
|
||||
long mappedAddress = fileChannel.map(FileChannel.MapMode.READ_ONLY, 0, fileSize, java.lang.foreign.Arena.global()).address();
|
||||
chunks[0] = mappedAddress;
|
||||
long endAddress = mappedAddress + fileSize;
|
||||
Scanner s = new Scanner(mappedAddress, mappedAddress + fileSize);
|
||||
for (int i = 1; i < numberOfChunks; ++i) {
|
||||
long chunkAddress = mappedAddress + i * segmentSize;
|
||||
// Align to first row start.
|
||||
while (chunkAddress < endAddress && (s.getLongAt(chunkAddress++) & 0xFF) != '\n')
|
||||
;
|
||||
chunks[i] = Math.min(chunkAddress, endAddress);
|
||||
}
|
||||
chunks[numberOfChunks] = endAddress;
|
||||
return chunks;
|
||||
}
|
||||
}
|
||||
|
||||
private static class Scanner {
|
||||
|
||||
private static final sun.misc.Unsafe UNSAFE = initUnsafe();
|
||||
@ -387,6 +470,10 @@ public class CalculateAverage_thomaswue {
|
||||
return UNSAFE.getLong(pos);
|
||||
}
|
||||
|
||||
long getLongAt(long pos, long[] array) {
|
||||
return UNSAFE.getLong(array, pos + sun.misc.Unsafe.ARRAY_LONG_BASE_OFFSET);
|
||||
}
|
||||
|
||||
void setPos(long l) {
|
||||
this.pos = l;
|
||||
}
|
||||
|
||||
Loading…
Reference in New Issue
Block a user